peak_call.yaml 788 Bytes
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peak_call:
  - spp[tool]:
    - r_spp_nodups:
        inputs:
          - exp.bam
          - control.bam
        additional_inputs: null
        outputs:
          - dir(HMMMMM)
          - results.narrowPeak
          - results.pdf
          - results.ccscore
    - zcat_awk_sort_peaks:
        inputs:
          - results.narrowPeak
        additional_inputs: null
        outputs:
          - results_sorted.narrowPeak
  - macs2[tool]:
    - macs2_callpeak:
        inputs:
          - exp.bam
          - control.bam
          - prefix(HMMM)
        additional_inputs: null
        outputs:
          - results.narrowPeak
    - sort_awk_sort_peaks:
        inputs:
          - results.narrowPeak
        additional_inputs: null
        outputs:
          - results_sorted.narrowPeak