music_punctate.yaml 1.49 KB
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music_punctate:
  inputs:
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    prefix:
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      type: string
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    control.bed:
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      type: file
      file_type: bed
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    signal.bed:
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      type: file
      file_type: bed
  outputs:
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    scale_129.bed:
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      type: file
      file_type: bed
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    scale_194.bed:
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      type: file
      file_type: bed
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    scale_291.bed:
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      type: file
      file_type: bed
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    scale_437.bed:
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      type: file
      file_type: bed
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    scale_656.bed:
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      type: file
      file_type: bed
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    scale_985.bed:
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      type: file
      file_type: bed
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    scale_1477.bed:
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      type: file
      file_type: bed
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    scale_2216.bed:
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      type: file
      file_type: bed
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  command: MUSIC
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  arguments:
    - "--prefix":
        type: string
        changeable: false
        required: true
        has_value: true
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        default: "$prefix"
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    - "--peak_type":
        type: string
        changeable: false
        required: true
        has_value: true
        default: "punctate"
    - "--controls":
        type: file
        changeable: false
        required: true
        has_value: true
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        default: "$control.bed"
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    - "--signals":
        type: file
        changeable: false
        required: true
        has_value: true
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        default: "$signal.bed"
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    - "--mapp":
        type: rawfolder
        changeable: true
        required: true
        has_value: true
    - "--lmapp":
        type: numeric
        changeable: true
        required: true
        has_value: true
        default: 50
  walltime: 240
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  memory: 8000
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  cores: 1
  nodes: 1