Commit 0d05cd21 authored by Adam Caprez's avatar Adam Caprez
Browse files

Update sai-to-sam inputs

The `bwa samse` command requires the reference genome inputs as well.
parent 831f8a51
......@@ -18,7 +18,12 @@ align:
- ref_genome
- bwa.sai
- download_1.fastq
additional_inputs: null
additional_inputs:
- ref_genome.amb
- ref_genome.ann
- ref_genome.bwt
- ref_genome.pac
- ref_genome.sa
outputs:
- align.sam
paired[read_end]:
......
......@@ -3,7 +3,12 @@ bwa_sai_to_sam:
- genome_index
- sai
- fastq
additional_inputs: null
additional_inputs:
- bwa_genome
- bwa_genome
- bwa_genome
- bwa_genome
- bwa_genome
outputs:
- sam
command: bwa
......
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