Commit 241c210e authored by aknecht2's avatar aknecht2
Browse files

Fixed _add_file in check_grch38.

parent dfaec1ed
......@@ -174,7 +174,7 @@ class Workflow(object):
(base_file_prefix, base_file_ext) = os.path.splitext(os.path.basename(base_file))
base_file_ext = base_file_ext[1:]
base_file_name = gen_prefix + "." + base_file_ext
self._add_file(base_file_name)
self._add_file(base_file_name, base_file, "local")
if base_file_ext in chipathlon.conf.genomes[run["align"]]["base_file"]:
prefix = os.path.splitext(base_file)[0]
missing = []
......
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