From 37da658865bfaf4f6fa12cc8f635d58cc85ceb4e Mon Sep 17 00:00:00 2001
From: Adam Caprez <acaprez2@unl.edu>
Date: Tue, 15 Mar 2016 12:45:13 -0500
Subject: [PATCH] Change to setuptools to preserve file execute perms

---
 chipathlon/jobs/scripts/download_fastq.py        | 0
 chipathlon/jobs/scripts/sort_wrapper.sh          | 0
 chipathlon/jobs/scripts/zcat_wrapper.sh          | 0
 chipathlon/jobs/wrappers/bedtools_wrapper.sh     | 0
 chipathlon/jobs/wrappers/bowtie2_wrapper.sh      | 0
 chipathlon/jobs/wrappers/bwa_wrapper.sh          | 0
 chipathlon/jobs/wrappers/macs2_wrapper.sh        | 0
 chipathlon/jobs/wrappers/picard_wrapper.sh       | 0
 chipathlon/jobs/wrappers/r_spp_nodups_wrapper.sh | 0
 chipathlon/jobs/wrappers/samtools_wrapper.sh     | 0
 setup.py                                         | 2 +-
 11 files changed, 1 insertion(+), 1 deletion(-)
 mode change 100644 => 100755 chipathlon/jobs/scripts/download_fastq.py
 mode change 100644 => 100755 chipathlon/jobs/scripts/sort_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/scripts/zcat_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/wrappers/bedtools_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/wrappers/bowtie2_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/wrappers/bwa_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/wrappers/macs2_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/wrappers/picard_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/wrappers/r_spp_nodups_wrapper.sh
 mode change 100644 => 100755 chipathlon/jobs/wrappers/samtools_wrapper.sh

diff --git a/chipathlon/jobs/scripts/download_fastq.py b/chipathlon/jobs/scripts/download_fastq.py
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/scripts/sort_wrapper.sh b/chipathlon/jobs/scripts/sort_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/scripts/zcat_wrapper.sh b/chipathlon/jobs/scripts/zcat_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/wrappers/bedtools_wrapper.sh b/chipathlon/jobs/wrappers/bedtools_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/wrappers/bowtie2_wrapper.sh b/chipathlon/jobs/wrappers/bowtie2_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/wrappers/bwa_wrapper.sh b/chipathlon/jobs/wrappers/bwa_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/wrappers/macs2_wrapper.sh b/chipathlon/jobs/wrappers/macs2_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/wrappers/picard_wrapper.sh b/chipathlon/jobs/wrappers/picard_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/wrappers/r_spp_nodups_wrapper.sh b/chipathlon/jobs/wrappers/r_spp_nodups_wrapper.sh
old mode 100644
new mode 100755
diff --git a/chipathlon/jobs/wrappers/samtools_wrapper.sh b/chipathlon/jobs/wrappers/samtools_wrapper.sh
old mode 100644
new mode 100755
diff --git a/setup.py b/setup.py
index 779ef15..6e519dd 100644
--- a/setup.py
+++ b/setup.py
@@ -1,4 +1,4 @@
-from distutils.core import setup
+from setuptools import setup, find_packages
 
 setup(
     name="chipathlon",
-- 
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