diff --git a/chipathlon/jobs/modules/peak_call.yaml b/chipathlon/jobs/modules/peak_call.yaml index 11246c41dc7369aae5de2039d0fc02250d9ec1a1..04206f58bba56c916e754962d63c2084cbe3b659 100644 --- a/chipathlon/jobs/modules/peak_call.yaml +++ b/chipathlon/jobs/modules/peak_call.yaml @@ -358,13 +358,22 @@ peak_call: param_name: full_result final_result: true - pepr[tool]: - - cp: - inputs: - control.bed: - param_name: input_file - outputs: - control2.bed: - param_name: output_file + - sharp[peak_type]: + - cp: + inputs: + control.bed: + param_name: input_file + outputs: + control2.bed: + param_name: output_file + - broad[peak_type]: + - cp: + inputs: + control.bed: + param_name: input_file + outputs: + control2.bed: + param_name: output_file - cp: inputs: signal.bed: