Commit 646bda8b authored by Adam Caprez's avatar Adam Caprez
Browse files

Merge branch 'bwa-args' into 'master'

Bwa args

See merge request !1
parents 4275cc55 f00b3821
...@@ -38,5 +38,10 @@ bwa_align_paired: ...@@ -38,5 +38,10 @@ bwa_align_paired:
changeable: false changeable: false
required: true required: true
has_value: false has_value: false
- "2>":
changeable: false
required: true
has_value: true
default: $outputs.0
walltime: 2000 walltime: 2000
memory: 2000 memory: 2000
...@@ -36,6 +36,11 @@ bwa_align_single: ...@@ -36,6 +36,11 @@ bwa_align_single:
required: false required: false
has_value: true has_value: true
default: 1 default: 1
- "-f":
changeable: false
required: true
has_value: true
default: $outputs.0
- "$inputs.0": - "$inputs.0":
changeable: false changeable: false
required: true required: true
......
...@@ -12,6 +12,11 @@ bwa_sai_to_sam: ...@@ -12,6 +12,11 @@ bwa_sai_to_sam:
changeable: false changeable: false
required: true required: true
has_value: false has_value: false
- "-f":
changeable: false
required: true
has_value: true
default: $outputs.0
- "$inputs.0": - "$inputs.0":
changeable: false changeable: false
required: true required: true
......
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