Update allowed file extensions

Add .bam for result and .narrowPeak.gz for bed file types.

chipathlon/conf.py

@@ -41,7 +41,7 @@ file_extensions = {
     "sai": ["sai"],
     "sam": ["sam"],
     "bam": ["bam"],
-    "bed": ["bed", "narrowPeak", "broadPeak", "tagAlign"],
+    "bed": ["bed", "narrowPeak", "broadPeak", "tagAlign", "narrowPeak.gz"],
     "bwa_genome": ["amb", "ann", "bwt", "pac", "sa"],
     "bowtie2_genome": ["1.bt2", "2.bt2", "3.bt2", "4.bt2", "rev.1.bt2", "rev.2.bt2"],
     "quality": ["quality"],
@@ -50,7 +50,7 @@ file_extensions = {
     "ccscore": ["ccscore"],
     "xls": ["xls"],
     "yaml": ["yaml"],
-    "result": ["bed", "narrowPeak", "broadPeak", "tagAlign"],
+    "result": ["bed", "narrowPeak", "broadPeak", "tagAlign", "bam"],
     "txt": ["txt"],
     "chrom_sizes": ["sizes"]
 }