Commit a5aa0c5c authored by aknecht2's avatar aknecht2
Browse files

I swear i've fixed this bug like three times now. Changed the order of dirs & files in os.walk.

parent bc31200f
......@@ -170,7 +170,7 @@ class RunData(object):
self.genomes[assembly]["chr_fasta"] = []
# Load chromosome files here:
base_dir = os.path.dirname(os.path.dirname(["genomes"][assembly]["chrom.sizes"] + "/"))
for root, files, dirs in os.walk(base_dir):
for root, dirs, files in os.walk(base_dir):
for f in files:
if f.startswith("chr"):
self._add_file(f, root + "/" + f, "local")
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