Commit c7dc50af authored by aknecht2's avatar aknecht2
Browse files

Added base_file adding to check_genome.

parent a05847f0
......@@ -168,6 +168,7 @@ class Workflow(object):
f = File(base_file_name)
f.addPFN(PFN(base_file, "local"))
self.files[base_file_name] = f
self.dax.addFile(f)
if base_file.split(".", 1)[1] in chipathlon.conf.genomes[run["align"]]["base_file"]:
prefix = base_file.split(".", 1)[0]
missing = []
......
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