- 12 Jun, 2017 1 commit
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aknecht2 authored
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- 22 May, 2017 1 commit
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aknecht2 authored
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- 03 Feb, 2017 1 commit
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aknecht2 authored
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- 13 May, 2016 1 commit
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aknecht2 authored
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- 26 Apr, 2016 1 commit
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Adam Caprez authored
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- 16 Mar, 2016 2 commits
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Adam Caprez authored
Will use the pegasus.change.dir profile option via `config.yaml` instead. This reverts commit c26ca54f.
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Adam Caprez authored
The BLAHP submit wrapper creates a temp directory and cd's there before running the executable. This breaks Pegasus jobs for a sharedfs site as it expects to be in the shared-scratch dir via the `remote_iwd` Condor ClassAd. This dir is available via the PEGASUS_SCRATCH_DIR env variable in the job, so cd there as a workaround.
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- 15 Mar, 2016 6 commits
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aknecht2 authored
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Adam Caprez authored
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aknecht2 authored
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aknecht2 authored
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aknecht2 authored
- 11 Mar, 2016 2 commits
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Adam Caprez authored
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aknecht2 authored
Updated workflow_module dependency handling. Updated download_fastq script. Added Ladunga experiment select mongodb pipeline.
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- 04 Mar, 2016 1 commit
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aknecht2 authored
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- 02 Mar, 2016 1 commit
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aknecht2 authored
Added download script. Updated job yaml. Updated module yaml. Add executable loading to workflow code. Updated database validation for new inputs.
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