Commits · 7c3969450c384e08326909c304f08172ebe55b0e · Holland Computing Center / chipathlon

01 Mar, 2016 1 commit

Updated yaml_job validation. Added workflow validation for modules,... · 7c396945

aknecht2 authored Mar 01, 2016

Updated yaml_job validation.  Added workflow validation for modules, yaml_jobs, and run files.  Added wrapper scripts for some commands.

7c396945

29 Feb, 2016 2 commits
- Added new tests. Added all sample verification. · 549e7cd0
  aknecht2 authored Feb 29, 2016
  
  549e7cd0
- Added new tests for experiment files. Updated db class with sample_file grabbing. · 0a181c3f
  aknecht2 authored Feb 29, 2016
  
  0a181c3f
26 Feb, 2016 3 commits
- Updated configuration info. Strengthened yaml validator. Adjusted names of workflow modules. · d52a0651
  aknecht2 authored Feb 26, 2016
  
  d52a0651
- Added initial yamlJob class. Added tester file for individual tests. Added... · 9c85952b
  aknecht2 authored Feb 26, 2016
```
Added initial yamlJob class.  Added tester file for individual tests.  Added missing command entry to bwa_align_paired.yaml.  Added internal configuration
```
  9c85952b
- Added module workflow files. Updated run.yaml · 23ad9c33
  aknecht2 authored Feb 26, 2016
  
  23ad9c33
25 Feb, 2016 1 commit
- Added examples. Created base db class with authentication> · 4ea8345f
  aknecht2 authored Feb 25, 2016
  
  4ea8345f
24 Feb, 2016 2 commits
- Added boilerplate workflow class. Modified job yaml. Added test input/run yaml. · 13235331
  aknecht2 authored Feb 24, 2016
  
  13235331
- Added individual job yaml files. · 2feb7312
  aknecht2 authored Feb 24, 2016
  
  2feb7312
23 Feb, 2016 3 commits
- Updated import script, fixed progress utility. · c59ee118
  aknecht2 authored Feb 23, 2016
  
  c59ee118
- Added initial setup script. Added utils module. Updated import script. · b2f7f01d
  aknecht2 authored Feb 23, 2016
  
  b2f7f01d
- Added metadata, and metadata import script. · f234af91
  Avi Knecht authored Feb 23, 2016
  
  f234af91
22 Feb, 2016 1 commit
- Added diagrams. · d5e98d68
  aknecht2 authored Feb 22, 2016
  
  d5e98d68
22 Jan, 2016 1 commit
- First commit. · 7f100d83
  aknecht2 authored Jan 22, 2016
  
  7f100d83