- 18 Mar, 2016 1 commit
-
-
aknecht2 authored
-
- 17 Mar, 2016 2 commits
-
-
aknecht2 authored
- 16 Mar, 2016 11 commits
-
-
Adam Caprez authored
With symlinking enabled, Pegasus will try to symlink the file even though it's an http:// LFN, which doesn't work. Add the file with a different site name so Pegasus will download it properly.
-
Adam Caprez authored
-
Adam Caprez authored
-
Adam Caprez authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
- 15 Mar, 2016 1 commit
-
-
aknecht2 authored
-
- 14 Mar, 2016 17 commits
-
-
Adam Caprez authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
aknecht2 authored
-
- 13 Mar, 2016 1 commit
-
-
aknecht2 authored
Fixed minor issues in param yaml scripts. Updated workflow to add jobs and create relevant pegasus information. Workflow can now generate download and alignment jobs, still needs testing. Setup updated to include job-scripts.
-
- 11 Mar, 2016 1 commit
-
-
aknecht2 authored
Updated workflow_module dependency handling. Updated download_fastq script. Added Ladunga experiment select mongodb pipeline.
-
- 10 Mar, 2016 1 commit
-
-
aknecht2 authored
Renamed yaml_job to workflow_job. Updated validation to support has_value & default. Workflow_module class can now generate jobs.
-
- 09 Mar, 2016 1 commit
-
-
aknecht2 authored
-
- 07 Mar, 2016 1 commit
-
-
aknecht2 authored
Added genome validation. Added module loading with minor validation. Added required file detection in modules.
-
- 04 Mar, 2016 1 commit
-
-
aknecht2 authored
-
- 02 Mar, 2016 1 commit
-
-
aknecht2 authored
Added download script. Updated job yaml. Updated module yaml. Add executable loading to workflow code. Updated database validation for new inputs.
-
- 01 Mar, 2016 1 commit
-
-
aknecht2 authored
Updated yaml_job validation. Added workflow validation for modules, yaml_jobs, and run files. Added wrapper scripts for some commands.
-