chipathlon merge requestshttps://git.unl.edu/hcc/chipathlon/-/merge_requests2017-01-30T14:37:13-06:00https://git.unl.edu/hcc/chipathlon/-/merge_requests/11Resolve "Module generator improvements"2017-01-30T14:37:13-06:00aknecht2Resolve "Module generator improvements"Closes #8
Lots of important adjustments in module_generator & individual modules. Module generator has been refactored to use new result/run/genome classes.Closes #8
Lots of important adjustments in module_generator & individual modules. Module generator has been refactored to use new result/run/genome classes.Workflow Module RefactorNatasha PavlovikjNatasha Pavlovikjhttps://git.unl.edu/hcc/chipathlon/-/merge_requests/10Minor fixes to the genome class2017-01-26T15:04:50-06:00aknecht2Minor fixes to the genome classMissed some stuff before merging. Oops.Missed some stuff before merging. Oops.Workflow Module RefactorNatasha PavlovikjNatasha Pavlovikjhttps://git.unl.edu/hcc/chipathlon/-/merge_requests/9Resolve "Create genome class"2017-01-26T14:49:24-06:00aknecht2Resolve "Create genome class"Closes #9Closes #9Workflow Module RefactorNatasha PavlovikjNatasha Pavlovikjhttps://git.unl.edu/hcc/chipathlon/-/merge_requests/8Resolve "Adjust input run.yaml format"2017-01-26T09:43:30-06:00aknecht2Resolve "Adjust input run.yaml format"Closes #2 Updates the run_parser to create new run class / genome class objects. #9 still not resolved, dummy class was used for testing.Closes #2 Updates the run_parser to create new run class / genome class objects. #9 still not resolved, dummy class was used for testing.Workflow Module Refactorhttps://git.unl.edu/hcc/chipathlon/-/merge_requests/7Resolve "Create result class"2017-01-25T19:06:01-06:00aknecht2Resolve "Create result class"Closes #6
Adds a result class to handle intermediate output instead of managing everything in a giant dictionary structure. Instances of result class will be added to the new Run class to manage data better.Closes #6
Adds a result class to handle intermediate output instead of managing everything in a giant dictionary structure. Instances of result class will be added to the new Run class to manage data better.Workflow Module RefactorNatasha PavlovikjNatasha Pavlovikjhttps://git.unl.edu/hcc/chipathlon/-/merge_requests/6Resolve "Create new run data class"2017-01-22T21:48:16-06:00aknecht2Resolve "Create new run data class"Created new Run class. Added tester methods to validate samples loaded by run.
Closes #10Created new Run class. Added tester methods to validate samples loaded by run.
Closes #10Workflow Module RefactorNatasha PavlovikjNatasha Pavlovikj