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2017-01-26
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* Great Lakes Conference in Chicago May 15-17th
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* Review Paper by Monday, Deadline for submission is next Wednesday
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* Generate new swooshy flow chart for the workflow
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* Think about scoring algorithm for different peak calling tool
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* Add idr granularity
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* Keep using random pairing for control / signal
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* Adjust signal input to list
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* Validate idr specification / narrow & broad peak specification
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* Generate read distribution from bam, otherwise use default
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* Create default ccat config file.
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* Remove peakranger gene annotation file
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2017-01-13
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* Modify ExpressOrtho perl script to confirm to perl style standards.
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