total # of sequences total # of bases total size in MB Trinity step 1 used time Trinity step 1 used memory Trinity step 2 used time Trinity step 2 used memory Trinity step 3 used time Trinity step 3 used memory Trinity step 4 used time Trinity step 4 used memory # of used CPUs
small_1.fastq 50,121 2,506,050 8.010 ~ 1 minute ~ 35 GB ~ 0.01 hours ~ 0.6 GB ~ 0.2 minutes ~ 0.07 GB ~ 0.008 hours ~ 0.8 GB 8
small_2.fastq 50,121 2,506,050 8.010
medium_1.fastq 786,742 59,792,392 152 ~ 3 minutes ~ 68 GB ~ 0.1 hours ~ 3 GB ~ 0.8 minutes ~ 0.6 GB ~ 0.3 hours ~ 5 GB 8
medium_2.fastq 786,742 59,792,392 152
large_1.fastq 10,174,715 1,027,646,215 3,376 ~ 58 minutes ~ 80 GB ~ 5 hours ~ 30 GB ~ 35 minutes ~ 8 GB ~ 13 hours ~ 30 GB 8
large_2.fastq 10,174,715 1,027,646,215 3,376