|
total # of sequences |
total # of bases |
total size in MB |
Trinity step 1 used time |
Trinity step 1 used memory |
Trinity step 2 used time |
Trinity step 2 used memory |
Trinity step 3 used time |
Trinity step 3 used memory |
Trinity step 4 used time |
Trinity step 4 used memory |
# of used CPUs |
small_1.fastq |
50,121 |
2,506,050 |
8.010 |
~ 1 minute |
~ 35 GB |
~ 0.01 hours |
~ 0.6 GB |
~ 0.2 minutes |
~ 0.07 GB |
~ 0.008 hours |
~ 0.8 GB |
8 |
small_2.fastq |
50,121 |
2,506,050 |
8.010 |
medium_1.fastq |
786,742 |
59,792,392 |
152 |
~ 3 minutes |
~ 68 GB |
~ 0.1 hours |
~ 3 GB |
~ 0.8 minutes |
~ 0.6 GB |
~ 0.3 hours |
~ 5 GB |
8 |
medium_2.fastq |
786,742 |
59,792,392 |
152 |
large_1.fastq |
10,174,715 |
1,027,646,215 |
3,376 |
~ 58 minutes |
~ 80 GB |
~ 5 hours |
~ 30 GB |
~ 35 minutes |
~ 8 GB |
~ 13 hours |
~ 30 GB |
8 |
large_2.fastq |
10,174,715 |
1,027,646,215 |
3,376 |