june_2014_bioinformatics_workshop.md 1.25 KB
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title = "HCC Bioinformatics Workshop, June 2013"
description = "HCC Bioinformatics Workshop, June 2013."
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Thursday, June 26 \| 10am-4pm (lunch will be provided)

Filley Hall, Room 302

**Please bring your laptop.  This will be a hands-on workshop.**

### Tentative Schedule

|              |                                                         |
|--------------|---------------------------------------------------------|
| 10am-10:45am | intro to HCC, account setup                             |
| 10:45am-12pm | intro to linux, basic commands, Globus account setup    |
| 12pm-1pm     | lunch (pizza will be provided)                          |
| 1pm-1:30pm   | editing files with nano                                 |
| 1:30pm-2pm   | cluster basics (SLURM, module), hello world example job |
| 2pm-4pm      | how to run BLAST jobs                                   |

 

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[Click to download ppt of
presentation.](https://unl.box.com/s/3raqcvv00x0m4qbn7ubukitu8b7q9e5r)
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[Click to download PDF of
presentation.](https://unl.box.com/s/bkozojpnt8hcwnnsc6eww1muy4fv9wb3)
 
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[Click to download BLAST presentation](https://unl.box.com/s/e8juelxpeomhehhm2zg57102s9aeqhuy)
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[Click to download example query
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file](https://unl.box.com/s/nk0bybekzqon368pxbfd77xykbuk1ywb)
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