diff --git a/content/applications/app_specific/bioinformatics_tools/_index.md b/content/applications/app_specific/bioinformatics_tools/_index.md index 7be0897105cff80bb9f898c11712c2217f1ecd02..211cf623fae3967e2dbac1f4a3f448ab50703aa5 100644 --- a/content/applications/app_specific/bioinformatics_tools/_index.md +++ b/content/applications/app_specific/bioinformatics_tools/_index.md @@ -6,8 +6,6 @@ weight = "52" The following is a categorized list of bioinformatics tools available on HCC. Each page contains summary of the tool, information about the HCC resources that have the specific tool, links to user documentation, as well as example SLURM submit scripts. -More detailed information about submitting SLURM jobs and checking job status on HCC can be found [here](../../submitting_jobs) +More detailed information about submitting SLURM jobs and checking job status on HCC can be found [here]({{< relref "/submitting_jobs/_index.md" >}}). {{% children %}} - - diff --git a/content/applications/app_specific/bioinformatics_tools/biodata_module.md b/content/applications/app_specific/bioinformatics_tools/biodata_module.md index d7ed97a317ff4c1c3c1c76e567e2f0843a50565d..c4b7c0a3037fc24efbac7e684fff85f6fd40c061 100644 --- a/content/applications/app_specific/bioinformatics_tools/biodata_module.md +++ b/content/applications/app_specific/bioinformatics_tools/biodata_module.md @@ -7,7 +7,7 @@ weight = "52" +++ -HCC hosts multiple databases (BLAST, KEGG, PANTHER, InterProScan), genome files, short read aligned indices etc. on Crane. +HCC hosts multiple databases (BLAST, KEGG, PANTHER, InterProScan), genome files, short read aligned indices etc. on Crane and Rhino. In order to use these resources, the "**biodata**" module needs to be loaded first. For how to load module, please check [Module Commands]({{< relref "/applications/modules/_index.md" >}}). diff --git a/content/handling_data/data_transfer/winscp.md b/content/handling_data/data_transfer/winscp.md index 317dd8245849b378dcf78bf9ee5c9578fe253b3c..2c5d61deffb23d5a63e80010313996f24660adcd 100644 --- a/content/handling_data/data_transfer/winscp.md +++ b/content/handling_data/data_transfer/winscp.md @@ -12,11 +12,11 @@ Usually it is convenient to upload and download files between your personal comp and the HCC supercomputers through a Graphic User Interface (GUI). Download and install the third party application **WinSCP** to connect the file systems between your personal computer and the HCC supercomputers. -Below is a step-by-step installation guide. Here we use the HCC cluster **Tusker** -for demonstration. To use the **Crane** cluster, replace `tusker.unl.edu` -with `crane.unl.edu`. +Below is a step-by-step installation guide. Here we use the HCC cluster **Crane** +for demonstration. To use the **Rhino** cluster, replace `crane.unl.edu` +with `rhino.unl.edu`. -1. On the first screen, type `tusker.unl.edu` for Host name, enter your +1. On the first screen, type `crane.unl.edu` for Host name, enter your HCC account username and password for User name and Password. Then click on **Login**.