From 32299bbc61311c580071bd2e5288ffbf8a485cad Mon Sep 17 00:00:00 2001 From: Natasha Pavlovikj <npavlovikj2@unl.edu> Date: Tue, 16 Apr 2024 12:34:45 -0500 Subject: [PATCH] Update Apptainer documentation --- content/applications/user_software/using_apptainer.md | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/content/applications/user_software/using_apptainer.md b/content/applications/user_software/using_apptainer.md index 12ac6185..62b9d631 100644 --- a/content/applications/user_software/using_apptainer.md +++ b/content/applications/user_software/using_apptainer.md @@ -55,6 +55,12 @@ and indicate you would like to use Apptainer. ## Use images on HCC resources +{{% notice info %}} +Apptainer can not be used on the login node. To run Apptainer on HCC resources, please start an [interactive session]({{< relref "../../../../submitting_jobs/creating_an_interactive_job.md" >}}) +or submit [SLURM job]({{< relref "../../submitting_jobs/" >}}). Next, please make sure the `apptainer` module is loaded such that the Apptainer variables are correctly set. +If Apptainer is run on the login node, or the `apptainer` module is not loaded, various error messages can occur. +{{% /notice %}} + To use Apptainer on HCC machines, first load the `apptainer `module. Apptainer provides a few different ways to access the container. Most common is to use the `exec` command to run a specific command -- GitLab