From 655ec9e5b0fb36e0dfa10d9614b337187094b039 Mon Sep 17 00:00:00 2001 From: Natasha Pavlovikj <npavlovikj2@unl.edu> Date: Wed, 15 May 2024 14:31:38 -0500 Subject: [PATCH] Fix numbering --- content/open_ondemand/cryosparc_interactive_app.md | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/content/open_ondemand/cryosparc_interactive_app.md b/content/open_ondemand/cryosparc_interactive_app.md index 7d99c63f..08413ca9 100644 --- a/content/open_ondemand/cryosparc_interactive_app.md +++ b/content/open_ondemand/cryosparc_interactive_app.md @@ -66,9 +66,9 @@ Please note that the _"master"_ process should be running while the submitted Cr #### CryoSPARC auxiliary programs In addition to CryoSPARC, the CryoSPARC OOD App provides a few auxiliary programs, such as wrapper scripts for **Topaz** and **deepEMhancer**. The executable paths to these scripts need to be set manually on a project-level. -Once this is done, the set location will apply to all future newly created jobs. -- The location of the wrapper script for Topaz is: `/usr/local/bin/topaz.sh` -- The location of the wrapper script for deepEMhancer is: `/usr/local/bin/deepemhancer.sh` +Once this is done, the set location will apply to all future newly created jobs. +- The location of the wrapper script for Topaz is: `/usr/local/bin/topaz.sh` +- The location of the wrapper script for deepEMhancer is: `/usr/local/bin/deepemhancer.sh` - The location of the deepEMhancer models is: `/usr/local/share/deepemhancer_models/` @@ -77,6 +77,7 @@ The default location of the CryoSPARC database is `$WORK/cryosparc`. - If you need to move this database elsewhere, please change the **CryoSPARC session path** using **Select Path** under the _Show advanced settings..._ checkbox. - If you want to store the CryoSPARC session folder (database and configuration files) elsewhere, please change the **CryoSPARC session path** before you start the CryoSPARC session. + #### CryoSPARC example If you want to test the CryoSPARC OOD App, you can use the [CryoSPARC Introductory Tutorial](https://guide.cryosparc.com/processing-data/get-started-with-cryosparc-introductory-tutorial). -- GitLab