Fixed up a few more minor issues.

chipathlon/workflow.py

@@ -103,7 +103,6 @@ class Workflow(object):
 
         # The steps to take when generating jobs
         self.generation_steps = [
-            self._load_config,
             self._load_executables,
             self._load_workflow_jobs,
             self._load_modules,

scripts/chip-gen

@@ -13,7 +13,7 @@ parser.add_argument("--properties", dest="properties", required=True, help="Path
 parser.add_argument("--execute-site", dest="execute_site", required=True, default="local", help="Target execute site.  Sites should be defined in configuration.")
 parser.add_argument("--output-site", dest="output_site", required=True, default="local", help="Target output site.  Site should be defined in configuration.")
 parser.add_argument("--chip-bin", dest="chip_bin", required=True, help="Path to chipathlon conda environment bin.")
-parser.add_argumnet("--idr-bin", dest="idr_bin", required=True, help="Path to idr conda enviornment bin.")
+parser.add_argument("--idr-bin", dest="idr_bin", required=True, help="Path to idr conda enviornment bin.")
 
 parser.add_argument("--email", dest="email", help="An email address to notify when the workflow is finished.")
 parser.add_argument("--no-save-db", dest="save_db", default=True, action="store_false", help="Whether or not to save results to the database.  Default: True")
@@ -33,7 +33,7 @@ workflow = Workflow(
     password=args.password,
     execute_site=args.execute_site,
     output_site=args.output_site,
-    email=email,
+    email=args.email,
     save_db=args.save_db,
     rewrite=args.rewrite,
     debug=args.debug