A start...

chipathlon/jobs/params/bedtools_bam_to_bed.yaml

chipathlon/jobs/params/bowtie2_align_paired.yaml

chipathlon/jobs/params/bowtie2_align_single.yaml

chipathlon/jobs/params/bwa_align_paired.yaml

chipathlon/jobs/params/bwa_align_single.yaml

chipathlon/jobs/params/cat_awk_sort_peaks.yaml

chipathlon/jobs/params/ccat_callpeak.yaml

chipathlon/jobs/params/chr_locus_convert.yaml

chipathlon/jobs/params/cp.yaml

chipathlon/jobs/params/db_save_result.yaml

chipathlon/jobs/params/download_from_encode.yaml

chipathlon/jobs/params/download_from_gridfs.yaml

chipathlon/jobs/params/gem_callpeak.yaml

chipathlon/jobs/params/idr.yaml

chipathlon/jobs/params/macs2_broad.yaml

chipathlon/jobs/params/macs2_narrow.yaml

chipathlon/jobs/params/music_broad.yaml

chipathlon/jobs/params/music_narrow.yaml

chipathlon/jobs/params/music_punctate.yaml

chipathlon/jobs/params/peakranger_callpeak.yaml