Added bed & peak file saving functionality to the database class. Updated...
Added bed & peak file saving functionality to the database class. Updated testing script to use unittests. Updated experiment_from_samples script to only print out unique values. Added list of current tools to conf.
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- chipathlon/conf.py 12 additions, 0 deletionschipathlon/conf.py
- chipathlon/db.py 191 additions, 81 deletionschipathlon/db.py
- chipathlon/jobs/scripts/db_save_bed.py 8 additions, 7 deletionschipathlon/jobs/scripts/db_save_bed.py
- chipathlon/test/insert_tests/sample.bed 1000 additions, 0 deletionschipathlon/test/insert_tests/sample.bed
- chipathlon/test/insert_tests/sample.narrowPeak 1000 additions, 0 deletionschipathlon/test/insert_tests/sample.narrowPeak
- chipathlon/tester.py 50 additions, 115 deletionschipathlon/tester.py
- examples/experiment_from_cells.py 4 additions, 1 deletionexamples/experiment_from_cells.py
- scripts/run_from_exp.py 35 additions, 0 deletionsscripts/run_from_exp.py
- setup.py 3 additions, 1 deletionsetup.py
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