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Commit 5cee1ca4 authored by aknecht2's avatar aknecht2
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Replaced jamm with peakranger for valid peak calling tools. Added path as...

Replaced jamm with peakranger for valid peak calling tools.  Added path as optional param for arguments.
parent 66573a5e
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1 merge request!16Resolve "Job Param File Adjustments"
...@@ -33,7 +33,7 @@ peak_tools = [ ...@@ -33,7 +33,7 @@ peak_tools = [
"spp", "spp",
"macs2", "macs2",
"gem", "gem",
"jamm", "peakranger",
"ccat" "ccat"
] ]
...@@ -103,7 +103,7 @@ argument_types = { ...@@ -103,7 +103,7 @@ argument_types = {
# Defines information about arguments # Defines information about arguments
argument_keys = { argument_keys = {
"required": ["type", "changeable", "has_value"], "required": ["type", "changeable", "has_value"],
"optional": ["required", "default", "file_type"] "optional": ["required", "default", "file_type", "path"]
} }
# workflow_job keys # workflow_job keys
......
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