Removed non-existant verbose argument. Removed input/output directory options.

chipathlon/jobs/params/pepr_callpeak.yaml

@@ -96,23 +96,6 @@ pepr_callpeak:
         required: false
         has_value: true
         default: 1
-    - "--input-directory":
-        type: string
-        changeable: true
-        required: false
-        has_value: true
-        default: ""
-    - "--output-directory":
-        type: string
-        changeable: true
-        required: false
-        has_value: true
-        default: ""
-    - "--verbose":
-        type: string
-        changeable: false
-        required: true
-        has_value: false
   walltime: 120
   memory: 16000
   cores: 1