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Added option to prevent saving files to database. Updated generator handling...
Added option to prevent saving files to database. Updated generator handling of save_db & rewrite arguments. Minor style fixes & comment updates. Chip-gen now supports --save-db option.
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- chipathlon/generators/align_generator.py 14 additions, 3 deletionschipathlon/generators/align_generator.py
- chipathlon/generators/idr_generator.py 14 additions, 3 deletionschipathlon/generators/idr_generator.py
- chipathlon/generators/module_generator.py 22 additions, 7 deletionschipathlon/generators/module_generator.py
- chipathlon/generators/peak_call_generator.py 14 additions, 3 deletionschipathlon/generators/peak_call_generator.py
- chipathlon/generators/remove_duplicates_generator.py 14 additions, 3 deletionschipathlon/generators/remove_duplicates_generator.py
- chipathlon/workflow.py 44 additions, 17 deletionschipathlon/workflow.py
- scripts/chip-gen 2 additions, 0 deletionsscripts/chip-gen
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