Merge branch 'hugoupg' into 'master'

Correct markdown links (removing space) and switch renderer to Hugo default See merge request hcc/hcc-docs!199

Merge branch 'hugoupg' into 'master'
72ece143 · John Thiltges · 56817e74 · 7399a2cf · 72ece143 · 72ece143
Commit 72ece143 authored 5 years ago by John Thiltges
--- a/content/applications/app_specific/bioinformatics_tools/data_manipulation_tools/sratoolkit.md
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--- a/content/applications/app_specific/bioinformatics_tools/de_novo_assembly_tools/oases.md
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--- a/content/applications/app_specific/bioinformatics_tools/de_novo_assembly_tools/ray.md
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--- a/content/applications/app_specific/bioinformatics_tools/de_novo_assembly_tools/soapdenovo2.md
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--- a/content/applications/app_specific/bioinformatics_tools/de_novo_assembly_tools/trinity/_index.md
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--- a/content/applications/app_specific/bioinformatics_tools/de_novo_assembly_tools/velvet/_index.md
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--- a/content/applications/app_specific/bioinformatics_tools/pre_processing_tools/cutadapt.md
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--- a/content/applications/app_specific/bioinformatics_tools/pre_processing_tools/prinseq.md
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--- a/content/applications/app_specific/bioinformatics_tools/pre_processing_tools/scythe.md
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--- a/content/applications/app_specific/bioinformatics_tools/pre_processing_tools/sickle.md
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--- a/content/applications/app_specific/bioinformatics_tools/pre_processing_tools/tagcleaner.md
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--- a/content/applications/app_specific/bioinformatics_tools/reference_based_assembly_tools/cufflinks.md
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--- a/content/applications/app_specific/bioinformatics_tools/removing_detecting_redundant_sequences/cd_hit.md
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--- a/content/applications/app_specific/fortran_c_on_hcc.md
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--- a/content/applications/app_specific/running_gaussian_at_hcc.md
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--- a/content/connecting/mobaxterm.md
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--- a/content/good_hcc_practices/_index.md
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