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    %adapted from:
%https://github.com/rossibarra/CV

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  pdfkeywords = {comparative genomics, maize, grasses},
  pdftitle = {\name: Curriculum Vitae},
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% Place name at left
\centerline{\huge \textsc{Curriculum Vitae}}
\vspace{0.25in}
\centerline{\huge \textsc{\name}}

% Alternatively, print name centered and bold:
%\centerline{\huge \bf \name}

\vspace{0.25in}

%ADDRESS
\begin{minipage}{0.5\linewidth}
  \begin{center}
  \href{http://bigdata.unl.edu/}{Quantitative Life Sciences Initiative}\\
  \href{http://www.unl.edu/psi/}{Center for Plant Science Innovation}\\
  \href{https://foodforhealth.unl.edu/}{Nebraska Food for Health Center}\\
  \href{http://agronomy.unl.edu}{Department of Agronomy \& Horticulture}\\
  \href{http://www.unl.edu}{University of Nebraska-Lincoln} \\
\end{center}
\end{minipage}
\begin{minipage}{0.5\linewidth}
  \begin{center}
  \begin{tabular}{ll}
    Office: & E207 Beadle Center \\
    Phone: & (402) 472-3192 \\
%    Fax: &   \\
    Email: & \href{mailto:schnable@unl.edu}{schnable@unl.edu} \\
    Web: & \href{http://www.schnablelab.org/}{schnablelab.org} \\
%    \\
  \end{tabular}
\end{center}
\end{minipage}

%EMPLOYMENT
\section*{Employment}
\begin{itemize}
\item Assistant Professor \hfill 2014-present \\Department of Agronomy and Horticulture, University of Nebraska-Lincoln
\item NSF PGRP Fellowship Supported Visiting Scholar \hfill 2014\\Chinese Academy of Agricultural Sciences
\item NSF PGRP Fellowship Supported Postdoctoral Researcher \hfill 2013\\Donald Danforth Plant Science Center
\end{itemize}

%EDUCATION
\section*{Education}
\begin{itemize}
 \item PhD Plant Biology (with Michael Freeling) \hfill 2008-2012\\University of California-Berkeley
 \item BA Biology \hfill 2004-2008\\Cornell University 
\end{itemize}

\section*{Honors and Awards}
\begin{itemize}
\item Marcus Rhoades Early Career Award\hfill2018
\item Junior Faculty Excellence in Research Award, University of Nebraska-Lincoln\hfill2016
%\item UNL Nominee, New Innovator in Food and Agriculture Research\hfill2017
\item Faculty Fellow, Robert B. Dougherty Water for Food Institute\hfill2016-Present
\end{itemize}

\section*{Research Support}
\subsection*{Federal (Current)}
\begin{itemize}
\item NSF ``RoL: FELS: EAGER: Genetic Constraints on the Increase of Organismal Complexity Over Time'' (PI)
    \item USDA-NIFA ``Identifying mechanisms conferring low temperature tolerance in maize, sorghum, and frost tolerant relatives.'' (PI)
\item USDA/NSF Joint Program ``PAPM EAGER: Transitioning to the next generation plant phenotyping robots.'' (co-PI)
\item ARPA-E ``In-plant and in-soil microsensors enabled high-throughput phenotyping of root nitrogen uptake and nitrogen use efficiency.'' (co-PI)
\item NSF ``Center for Root and Rhizobiome Innovation.'' (Investigator \& Management Team Member)
%\item NSF ``RII Track-2 FEC: Functional analysis of nitrogen responsive networks in Sorghum.'' (co-PI)
\item DOE-JGI Community Sequencing Program ``Expanding grass genome comparators.''
\end{itemize}
\subsection*{Non-Federal (Current)}
\begin{itemize}
\item North Central Sun Grants ``High through put phenotyping to accelerate biomass sorghum improvement.'' (co-PI)
\item Nebraska Corn Board ``Genomes to Fields (G2F) - Predicting Final Yield Performance in Variable Environments.'' (PI)
\item Wheat Innovation Foundation ``A Low-Cost, High-Throughput Cold Stress Perception Assay for Sorghum Breeding.'' (co-PI)
\item Midwest Big Data Hub ``Automatic feature extraction pipeline development for high-throughput plant phenotyping'' (co-PI)
\item Agricultural Research Division ``A High Throughput Phenotyping Reference Dataset for GWAS in Sorghum'' (PI)
\item Daugherty Water for Food Global Institute ``Optimizing the Water Use Efficiency of C4 Grain Crops Using Comparative Phenomics and Crop Models to Guide Breeding Targets.'' (PI)
\end{itemize}
\subsection*{Completed Projects}
\begin{itemize}
\item ICRISAT ``Application of tGBS And Genomic Selection to a Hybrid Pearl Millet Breeding Program.''
\item Iowa Corn Board ``Field Deployable Cameras to Quantify Dynamic Whole Plant Phenotypes in the Field.'' (PI)
\item ConAgra ``Marker Discovery \& Genetic Diversity.'' (in popcorn) (PI)
\item Layman Award ``Developing genomic tools in proso millet and comparing water use efficiency among panicoid grass crops (proso millet, corn, sorghum, foxtail millet)'' (co-PI)
\end{itemize}
%\section*{Pending Support}
%\begin{itemize}
%\item ARPA-E ``In-plant and in-soil microsensors enabled high-throughput phenotyping of root nitrogen uptake and nitrogen use efficiency.''
%\end{itemize}

\section*{Economic Development}
\begin{itemize}
\item Co-Founder, \href{https://www.engeniousag.com/}{EnGeniousAg LLC}\hfill2017-Present\\
\textit{Designs, manufactures, and deploys low-cost, instant readout, high-performance, field-based nutrient sensors for crops, soil, and water, improving agronomic management practices, increasing grower profitability and reducing the environmental footprint of agriculture.}
\item Founder, Dryland Genetics LLC\hfill2014-Present\\
\textit{Using high throughput quantitative genetics and field phenotyping techologies to develop and commericialize higher yielding cultivars of crops already naturally adapted to using little water and growing arid regions where conventional agriculture fails in the absence of irrigation.}
\item Co-Founder, Data2Bio LLC (USA) \& \begin{CJK*}{UTF8}{gbsn}DATA生物科技（北京）有限公司\end{CJK*} (China) \hfill2010-Present\\
\textit{Providing patented tGBS genotyping and genomic selection services to public and private sector plant and animal breeders in the USA and China.}
\item Scientific Advisory Council, GeneSeek, Inc\hfill2017-Present
\item External Advisor to the Scientific Advisory Board, Indigo Agriculture\hfill2017
\item External Advisor to the Scientific Advisory Board, Syngenta AG\hfill2016
\end{itemize}

\section*{Advising}
\begin{itemize}
\item Current Advisees: Daniel Carvalho (PhD, Agronomy \& Horticulture), Zhikai Liang (PhD, Agronomy \& Horticulture), Chenyong Miao (PhD, Agronomy \& Horticulture), Xiuru Dai (PhD, Shandong Agriculture University), Preston Hurst (MS, Agronomy \& Horticulture), Nate Korth (co-advised, PhD, Food Science)
\item Thesis Committee: Abbas Atefi (PhD, Biological Systems Engineering), Yen Ning Chai (PhD, Agronomy \& Horticulture), Waseen Huassain (PhD, Agronomy \& Horticulture), Ying Ren (PhD, Agronomy \& Horticulture), Mallory Suhr (PhD, Food Science), Qinnan Yang (PhD, Food Science), Ronghao Wang (PhD, Statistics), Piyush Pandey (MS, Biological Systems Engineering), Thao Yu (MS, Statistics)
\item Graduated Advisees: Xianjun Lai (PhD, Sichuan Agriculture University), Bhushit Agarwal (co-advised, MS, Computer Science \& Engineering), Srinidhi Bashyam (co-advised, MS, Computer Science \& Engineering)
\end{itemize}

\section*{Publications} 
\begin{center}
H-Index: 21 \href{https://scholar.google.com/citations?user=cik4JVYAAAAJ}{Google Scholar} \\
\emph{Lab members in bold, $^*$equal contribution, $^\ddagger$undergraduate, $^\S$corresponding}
\end{center}


\addtolength{\leftskip}{9mm}
\subsection*{Preprints}

\textbf{Miao C}, \textbf{Yang, J}, \textbf{Schnable JC}.$^\S$ Optimizing the identification of causal variants across varying genetic architectures in crops. \textsc{bioRxiv} doi: \href{https://doi.org/10.1101/310391}{10.1101/310391}\\

\textbf{Yan L}, \textbf{Lai X}, Rodriguez O, Mahboub S, Roston RL, \textbf{Schnable JC}.$^\S$ Parallels between artificial selection in temperate maize and natural selection in the cold-adapted crop-wild relative Tripsacum. \textsc{bioRxiv} doi: \href{https://doi.org/10.1101/187575}{10.1101/187575}\\

\subsection*{Other Manuscripts in Review}

Zou C, Miki D, Li D, Tang Q, Xiao L, Rajput S, Deng P, Peng L, Huang R, Zhang M, Sun Y, Hu J, Fu X, Schnable P, Li F, Zhang H, Feng B, Zhu X, Liu R, \textbf{Schnable JC}, Zhu JK, Zhang H.$^\S$ The genome of broomcorn millet (\textit{Panicum miliaceum} L.) \textit{(In Review)}\\

\begin{etaremune}
\subsection*{Faculty Publications}

\item Ott A, \textbf{Schnable JC}, Yeh CT, Wu L, Liu C, Hu HC, Dolgard CL, Sarkar S, Schnable PS$^\S$ (2018) Linked read technology for assembling large complex and polyploid genomes. \textsc{BMC Genomics} \textit{(Accepted)}
    
\item Liu S,$^*$ \textbf{Schnable JC},$^*$ Ott A,$^*$ Yeh CT, Springer NM, Yu J, Meuhbauer G, Timmermans MCP, Scanlon MJ, Schnable PS$^\S$ (2018) Intragenic Meiotic Crossovers Generate Novel Alleles with Transgressive Expression Levels. \textsc{Molecular Biology and Evolution} doi: \href{https://academic.oup.com/mbe/advance-article/doi/10.1093/molbev/msy174/5090457?guestAccessKey=0823f03f-550f-40ac-9f4b-1c3670490e94}{10.1093/molbev/msy174}

\item \textbf{Raju SKK}, Barnes A, \textbf{Schnable JC}, Roston RL$\S$ (2018) Low-temperature tolerance in land plants: Are transcript and membrane responses conserved? \textsc{Plant Science} doi: \href{https://doi.org/10.1016/j.plantsci.2018.08.002}{10.1016/j.plantsci.2018.08.002}

\item \textbf{Miao C}, Fang J, Li D, Liang P, Zhang X, \textbf{Yang J}, \textbf{Schnable JC}, Tang H$\S$ (2018) Genotype-Corrector: improved genotype calls for genetic mapping. \textsc{Scientific Reports} doi: \href{https://doi.org/10.1038/s41598-018-28294-0}{10.1038/s41598-018-28294-0}

\item Alkhalifah N, Campbell DA, Falcon CM, ... \textbf{Schnable JC} (31 of 44 authors) ... Spalding EP, Edwards J, Lawrence-Dill CJ$^\S$ (2018) Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets. \textsc{BMC Research Notes} doi: \href{https://doi.org/10.1186/s13104-018-3508-1}{10.1186/s13104-018-3508-1}

\item \textbf{Liang Z}, Gupta SK, Yeh CT, \textbf{Zhang Y}, \textbf{Ngu DW},$^\ddagger$ Kumar R, Patil HT, Mungra KD, Yadav DV, Rathore A, Srivastava RK, Gupkta R, \textbf{Yang J}, Varshney RK, Schnable PS, \textbf{Schnable JC}$^\S$ (2018) Phenotypic data from inbred parents can improve genomic prediction in pearl millet hybrids. \textsc{G3: Genes Genomes Genetics} doi: \href{https://doi.org/10.1534/g3.118.200242}{10.1534/g3.118.200242}

\item Xu Y, Qiu Y, \textbf{Schnable JC}$^\S$ (2018) Functional modeling of plant growth dynamics. \textsc{The Plant Phenome} doi: \href{https://doi.org/10.2135/tppj2017.09.0007}{10.2135/tppj2017.09.0007} \textsc{bioRxiv} doi: \href{https://doi.org/10.1101/190967}{10.1101/190967}

\item \textbf{Carvalho DS}, \textbf{Schnable JC}, Almeida AMR$^\S$ (2018) Integrating phylogenetic and network approaches to study gene family evolution: the case of the AGAMOUS family of floral genes. \textsc{Evolutionary Bioinformatics} doi: \href{https://doi.org/10.1177/1176934318764683}{10.1177/1176934318764683} \textsc{bioRxiv} doi: \href{https://doi.org/10.1101/195669}{10.1101/195669}

\item \textbf{Lai X}, \textbf{Yan L}, Lu Y, \textbf{Schnable JC}$^\S$ (2018) Largely unlinked gene sets targeted by selection for domestication syndrome phenotypes in maize and sorghum. \textsc{The Plant Journal} doi: \href{https://doi.org/10.1111/tpj.13806}{10.1111/tpj.13806} \textsc{bioRxiv} doi: \href{https://doi.org/10.1101/184424}{10.1101/184424}

\item \textbf{Liang Z}, \textbf{Schnable JC}$^\S$ (2017) Functional divergence between subgenomes and gene pairs after whole genome duplications. \textsc{Molecular Plant} doi: \href{http://doi.org/10.1016/j.molp.2017.12.010}{10.1016/j.molp.2017.12.010}

\item \textbf{Liang Z}, Pandey P, Stoerger V, Xu Y, Qiu Y, Ge Y, \textbf{Schnable JC}$^\S$ (2017) Conventional and hyperspectral time-series imaging of maize lines widely used in field trials. \textsc{GigaScience} doi: \href{https://academic.oup.com/gigascience/advance-article/doi/10.1093/gigascience/gix117/4656251?guestAccessKey=71c1c32f-78fd-42c0-99a3-38e6c4fd8100}{10.1093/gigascience/gix117} \textsc{bioRxiv} doi: \href{https://doi.org/10.1101/169045}{10.1101/169045} 

\item Gage J, Jarquin D, Romay M, ... \textbf{Schnable JC} (29th of 40 authors) .. Yu J, de Leon N$^\S$ (2017) The effect of artificial selection on phenotypic plasticity in maize. \textsc{Nature Communications} doi: \href{https://doi.org/10.1038/s41467-017-01450-2}{10.1038/s41467-017-01450-2}\\
\textit{Selected as an Editor's Choice by MaizeGDB Editorial Board} December 2017


\item Washburn JD, {\bf Schnable JC}, Brutnell TP, Shao Y, {\bf Zhang Y}, Ludwig M, Davidse G, Pires JC$^\S$ (2017) Genome-guided phylo-transcriptomic methods and the nuclear phylogentic tree of the paniceae grasses. \textsc{Scientific Reports} doi: \href{https://doi.org/10.1038/s41598-017-13236-z}{10.1038/s41598-017-13236-z}

\item Ott A,$^*$ Liu S,$^*$ \textbf{Schnable JC}, Yeh CT, Wang C, Schnable PS$^\S$ (2017) Tunable Genotyping-By-Sequencing (tGBS\textregistered) enables reliable genotyping of heterozygous loci. \textsc{Nucleic Acids Research} doi: \href{https://academic.oup.com/nar/article/doi/10.1093/nar/gkx853/4210942/tGBS-genotypingbysequencing-enables-reliable?guestAccessKey=0ba723ae-c6b2-4d7f-841e-cd46b4bf68f9}{10.1093/nar/gkx853} 

\item \textbf{Lai X}, \textbf{Schnable JC}, Liao Z, Xu J, Zhang G, Li C, Hu E, Rong T, Xu Y, Lu Y$^\S$ (2017) Genome-wide characterization of non-reference transposable elements insertion polymorphisms reveals genetic diversity in tropical and temperate maize. \textsc{BMC Genomics} doi: \href{https://doi.org/10.1186/s12864-017-4103-x}{10.1186/s12864-017-4103-x}

\item Mei W, Boatwright L, Feng G, \textbf{Schnable JC}, Barbazuk WB$^\S$ (2017) Evolutionarily conserved alternative splicing across monocots. \textsc{Genetics} doi: \href{https://doi.org/10.1534/genetics.117.300189}{10.1534/genetics.117.300189}\\
{\it Cover Article October 2017 Issue}

\item Pandey P, Ge Y$^\S$, Stoerger V, \textbf{Schnable JC} (2017) High throughput in vivo analysis of plant leaf chemical properties using hyperspectral imaging. \textsc{Frontiers in Plant Science} doi \href{http://dx.doi.org/10.3389/fpls.2017.01348}{10.3389/fpls.2017.01348}

\item \textbf{Zhang Y}, \textbf{Ngu DW},$^\ddagger$ \textbf{Carvalho D}, \textbf{Liang Z}, Qiu Y, Roston RL, \textbf{Schnable JC}$^\S$ (2017) Differentially regulated orthologs in sorghum and the subgenomes of maize. \textsc{The Plant Cell} doi: \href{https://doi.org/10.1105/tpc.17.00354}{10.1105/tpc.17.00354} \\
\textit{Selected as an Editor's Choice by MaizeGDB Editorial Board} August 2017

\item {\bf Lai X},$^*$ Behera S,$^*$ {\bf Liang Z}, Lu Y, Deogun JS, {\bf Schnable JC}$^\S$ (2017) STAG-CNS: An order-aware conserved noncoding sequence discovery tool for arbitrary numbers of species. \textsc{Molecular Plant}. doi: \href{http://dx.doi.org/10.1016/j.molp.2017.05.010}{10.1016/j.molp.2017.05.010}

\item {\bf Lai X}, {\bf Schnable JC}$^\S$ (2017) Harnessing the potential of the tea tree genome. \textsc{Molecular Plant}.  doi: \href{http://dx.doi.org/10.1016/j.molp.2017.05.009}{10.1016/j.molp.2017.05.009}

\item Mei W, Liu S, \textbf{Schnable JC}, Yeh C, Springer NM, Schnable PS, Barbazuk WB$^\S$ (2017) A comprehensive analysis of alternative splicing in paleopolyploid maize. \textsc{Frontiers in Plant Science} doi: \href{http://dx.doi.org/10.3389/fpls.2017.00694}{10.3389/fpls.2017.00694}

\item Joyce BL, Huag-Baltzell A, Davey S, Bomhoff M, {\bf Schnable JC}, Lyons E$^\S$ (2016) FractBias: a graphical tool for assessing fractionation bias after whole genome duplications. \textsc{Bioinformatics}  doi: \href{http://dx.doi.org/10.1093/bioinformatics/btw666}{10.1093/bioinformatics/btw666}

\item Walley JW,$^*$ Sartor RC,$^*$ Shen Z, Schmitz RJ, Wu KJ, Urich MA, Nery JR, Smith LG, \textbf{Schnable JC}, Ecker JR, Briggs SP$^\S$ (2016) Integration of omic networks in a developmental atlas of maize. \textsc{Science} doi: \href{http://dx.doi.org/10.1126/science.aag1125}{10.1126/science.aag1125}\\
\textit{ Selected as an Editor's Choice by MaizeGDB Editorial Board} September 2016

\item Ge Y$^\S$, Bai G, Stoerger V, {\bf Schnable JC} (2016) Temporal dynamics of maize plant growth, water use, and plant water content using automated high throughput RGB and hyperspectral imaging. \textsc{Computers and Electronics in Agriculture} doi: \href{http://dx.doi.org/10.1016/j.compag.2016.07.028}{10.1016/j.compag.2016.07.028}

\item {\bf Liang Z}, {\bf Schnable JC}$^\S$ (2016) RNA-seq based analysis of population structure within the maize inbred B73. \textsc{PLoS One} doi: \href{http://dx.doi.org/10.1371/journal.pone.0157942}{10.1371/journal.pone.0157942} 

\item Rajput SG, Santra DK$^\S$, {\bf Schnable JC} (2016) Mapping QTLs for morpho-agronomic traits in proso millet ( \textit {Panicum miliaceum} L.). \textsc{Molecular Breeding} doi: \href{http://dx.doi.org/10.1007/s11032-016-0460-4}{10.1007/s11032-016-0460-4}

\item Chao S, Wu J, Liang J, {\bf Schnable JC}, Yang W, Cheng F, Wang X$^\S$ (2016) Impacts of whole genome triplication on MIRNA evolution in \textit {Brassica rapa}. \textsc {Genome Biology and Evolution} doi: \href{http://dx.doi.org/10.1093/gbe/evv206}{10.1093/gbe/evv206}

\item Tang H, Bomhoff MD, Briones E, {\bf Schnabe JC}, Lyons E$^\S$ (2015) SynFind: compiling syntenic regions across any set of genomes on demand. \textsc {Genome Biology and Evolution} doi: \href{http://dx.doi.org/10.1093/gbe/evv219}{10.1093/gbe/evv219}

\item Washburn JD, {\bf Schnable JC}, Davidse G, Pires JC$^\S$ (2015) Phylogeny and photosynthesis of the grass tribe Paniceae. \textsc {American Journal of Botany} doi: \href{http://dx.doi.org/10.3732/ajb.1500222}{10.3732/ajb.1500222}

\item Tang H, Zhang X, {\bf Miao C}, Zhang J, Ming R, {\bf Schnable JC}, Schnable PS, Lyons E, Lu J$^\S$ (2015) ALLMAPS: robust scaffold ordering based on multiple maps. \textsc {Genome Biology} doi: \href{http://dx.doi.org/10.1186/s13059-014-0573-1}{10.1186/s13059-014-0573-1}

\item {\bf Schnable JC}$^\S$ (2015) Genome evolution in maize: from genomes back to genes. \textsc {Annual Review of Plant Biology} doi: \href{http://dx.doi.org/10.1146/annurev-arplant-043014-115604}{10.1146/annurev-arplant-043014-115604}

\item Paschold A, Larson NB, Marcon C, {\bf Schnable JC}, Yeh C, Lanz C, Nettleton D, Piepho H, Schnable PS, Hochholdinger F$^\S$ (2014) Nonsyntenic genes drive highly dynamic complementation of gene expression in maize hybrids. \textsc {Plant Cell} doi: \href{http://dx.doi.org/10.1105/tpc.114.130948}{10.1105/tpc.114.130948}

\subsection*{Postdoctoral Publications}

    \item Nani TF, \textbf{Schnable JC}, Washburn JD, Albert P, Pereira WA, Sobrinho FS, Birchler JA, Techia VH$^\S$ (2018). Location of low copy genes in chromosomes of \textit{Brachiaria} spp. \textsc{Molecular Biology Reports} doi: \href{https://doi.org/10.1007/s11033-018-4144-5}{10.1007/s11033-018-4144-5}

\item Studer AJ$^*$, {\bf Schnable JC}$^*$, Weissmann S, Kolbe AR, McKain MR, Shao Y, Cousins AB, Kellogg EA, Brutnell TP$^\S$ (2016) The draft genome of \textit {Dichanthelium oligosanthes}: A C3 panicoid grass species. \textsc{Genome Biology} doi: \href{http://dx.doi.org/10.1186/s13059-016-1080-3}{10.1186/s13059-016-1080-3}

\item Huang P, Studer AJ, {\bf Schnable JC}, Kellogg EA, Brutnell TP$^\S$ (2016) Cross species selection scans identify components of C4 photosynthesis in the grasses. \textsc {Journal of Experimental Botany} doi: \href{http://dx.doi.org/10.1093/jxb/erw256}{10.1093/jxb/erw256}\\
{\it "Insight" highlighting this article by PA Christin also published in JXB doi: \href{https://doi.org/10.1093/jxb/erw390}{10.1093/jxb/erw390}}

\item Liu X, Tang S, Jia G, {\bf Schnable JC}, Su X, Tang C, Zhi H, Diao X$^\S$ (2016) The C-terminal motif of SiAGO1b is required for the regulation of growth, development and stress responses in foxtail millet [\textit {Setaria italica} (L.) P. Beauv]. \textsc {Journal of Experimental Botany} doi: \href{http://dx.doi.org/10.1093/jxb/erw135}{10.1093/jxb/erw135}

\item Jia G, Liu X, {\bf Schnable JC}, Niu Z, Wang C, Li Y, Wang Sh, Wang Su, Liu J, Gou E, Diao X$^\S$ (2015) Microsatellite variations of elite Setaria varieties released during last six decades in China. \textsc {PLoS One} doi: \href{http://dx.doi.org/10.1371/journal.pone.0125688}{10.1371/journal.pone.0125688}

\item Qie L, Jia G, Zhang W, {\bf Schnable JC}, Shang Z, Li W, Liu B, Li M, Chai, Y, Zhi H, Diao X$^\S$ (2014) Mapping of quantitative trait loci (QTLs) that contribute to germination and early seedling drought tolerance in the interspecific cross \textit {Setaria italica} x \textit {Setaria viridis}. \textsc {PLoS One} doi: \href{http://dx.doi.org/10.1371/journal.pone.0101868}{10.1371/journal.pone.0101868}

\item Diao X$^\S$, {\bf Schnable JC}, Bennetzen JL, Li J$^\S$ (2014) Initiation of Setaria as a model plant. \textsc {Frontiers of Agricultural Science and Engineering} doi: \href{http://dx.doi.org/10.15302/J-FASE-2014011}{10.15302/J-FASE-2014011}

\subsection*{Graduate Publications}

\item Cheng F, Sun C, Wu J, {\bf Schnable JC}, Woodhouse MR, Liang J, Cai C, Freeling M,$^\S$ Wang X$^\S$ (2016) Epigenetic regulation of subgenome dominance following whole genome triplication in \textit {Brassica rapa}. \textsc {New Phytologist} doi: \href {http://dx.doi.org/10.1111/nph.13884}{10.1111/nph.13884}

\item Almeida AMR, Yockteng R, {\bf Schnable JC}, Alvarez-Buylla ER, Freeling M, Specht CD$^\S$ (2014) Co-option of the polarity gene network shapes filament morphology in angiosperms. \textsc {Scientific Reports} doi: \href{http://dx.doi.org/10.1038/srep06194}{10.1038/srep06194}

\item Martin JA, Johnson NV, Gross SM, {\bf Schnable JC}, Meng X, Wang M, Coleman-Derr D, Lindquist E, Wei C, Kaeppler S, Chen F, Wang Z$^\S$ (2014) A near complete snapshot of the \textit {Zea mays} seedling transcriptome revealed from ultra-deep sequencing. \textsc {Scientific Reports} doi: \href{http://dx.doi.org/10.1038/srep04519}{10.1038/srep04519} \\
\textit{ Selected as an Editor's Choice by MaizeGDB Editorial Board} May 2014

\item Garsmeur O,$^*$ {\bf Schnable JC,}$^*$ Almeida A, Jourda C, D'Hont A,$^\S$ Freeling M$^\S$ (2014) Two evolutionarily distinct classes of paleopolyploidy. \textsc {Molecular Biology and Evolution} doi: \href{http://dx.doi.org/10.1093/molbev/mst230}{10.1093/molbev/mst230}

\item Turco G, {\bf Schnable JC}, Pedersen B, Freeling M$^\S$ (2013) Automated conserved noncoding sequence (CNS) discovery reveals differences in gene content and promoter evolution among the grasses. \textsc {Frontiers in Plant Sciences} doi: \href{http://dx.doi.org/10.3389/fpls.2013.00170}{10.3389/fpls.2013.00170}

\item {\bf Schnable JC}, Wang X, Pires JC, Freeling M$^\S$ (2012) Escape from preferential retention following repeated whole genome duplication in plants. \textsc{Frontiers in Plant Science} doi: \href{http://dx.doi.org/10.3389/fpls.2012.00094}{10.3389/fpls.2012.00094}

\item Freeling M$^\S$, Woodhouse MR, Subramaniam S, Turco G, Lisch D, {\bf Schnable JC} (2012) Fractionation mutagenesis and similar consequences of mechanisms removing dispensable or less-expressed DNA in plants. \textsc {Current Opinion in Plant Biology} doi: \href{http://dx.doi.org/10.1016/j.pbi.2012.01.015}{10.1016/j.pbi.2012.01.015}

\item Tang H$^\S$, Woodhouse MR, Cheng F, {\bf Schnable JC}, Pedersen BS, Conant GC, Wang X, Freeling M, Pires JC (2012) Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy. \textsc {Genetics} doi: \href{http://dx.doi.org/10.1534/genetics.111.137349}{10.1534/genetics.111.137349}

\item {\bf Schnable JC}, Freeling M, Lyons E$^\S$ (2012) Genome-wide analysis of syntenic gene deletion in the grasses. \textsc {Genome Biology and Evolution} doi: \href{http://dx.doi.org/10.1093/gbe/evs009}{10.1093/gbe/evs009}\\
\textit{ Selected as an Editor's Choice by MaizeGDB Editorial Board} Dec 2012

\item Zhang W, Wu Y, {\bf Schnable JC,} Zeng Z, Freeling M, Crawford GE, and Jiang J$^\S$ (2012) High-resolution mapping of open chromatin in the rice genome. \textsc{Genome Research} doi: \href{http://dx.doi.org/10.1101/gr.131342.111}{10.1101/gr.131342.111}

\item Eichten SR,$^*$ Swanson-Wagner RA,$^*$ {\bf Schnable JC,} Waters AJ, Hermanson PJ, Liu S, Yeh C, Jia Y, Gendler K, Freeling M, Schnable PS, Vaughn MW, Springer NM$^\S$ (2011) Heritable epigenetic variation among maize inbreds. \textsc {PLoS Genetics} doi: \href{http://dx.doi.org/10.1371/journal.pgen.1002372}{10.1371/journal.pgen.1002372} \\
\textit{ Selected as an Editor's Choice by MaizeGDB Editorial Board} Jan 2012

\item {\bf Schnable JC}, Lyons E$^\S$ (2011) Comparative genomics with maize and other grasses: from genes to genomes. \textsc {Maydica} 56(1763) 77-93 \href{http://www.schnablelab.org/Pubs/Maydica\_GenesGenomes.pdf}{Link directly to PDF}

\item Tang H, Lyons E, Pedersen B, {\bf Schnable JC}, Paterson AH, Freeling M. (2011) Screening synteny blocks in pairwise genome comparisons through integer programming. \textsc {BMC Bioinformatics} doi: \href{http://dx.doi.org/10.1186/1471-2105-12-102}{10.1186/1471-2105-12-102}

\item {\bf Schnable JC}, Pedersen BS, Subramaniam S, Freeling M$^\S$ (2011) Dose-sensitivity, conserved noncoding sequences and duplicate gene retention through multiple tetraploidies in the grasses. \textsc {Frontiers in Plant Science} doi: \href{http://dx.doi.org/10.3389/fpls.2011.00002}{10.3389/fpls.2011.00002}\\
{\it Commentary by Birchlier and Veitia also published in Frontiers in Plant Science doi: \href{http://dx.doi.org/10.3389/fpls.2011.00064}{10.3389/fpls.2011.00064}}

%<br>{\textsc (<a href="http://www.frontiersin.org/plant%20genetics%20and%20genomics/10.3389/fpls.2011.00064/full">Commentary on this article</a> by Birchler and Veitia, also published in Frontiers in Plant Science)}

\item {\bf Schnable JC}$^\S$, Freeling M (2011) Genes identifed by visible mutant phenotypes show increased bias towards one of two maize subgenomes. \textsc {PLoS One} doi: \href{http://dx.doi.org/10.1371/journal.pone.0017855}{10.1371/journal.pone.0017855}

\item {\bf Schnable JC}, Springer NM, Freeling M$^\S$ (2011) Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss. \textsc {Proceedings of the National Academy of Sciences} doi: \href{http://dx.doi.org/10.1073/pnas.1101368108}{10.1073/pnas.1101368108} \\
\textit{ Selected as an Editor's Choice by MaizeGDB Editorial Board} May 2011

\item Woodhouse MR,$^*$ {\bf Schnable JC},$^*$ Pedersen BS, Lyons E, Lisch D, Subramaniam S, Freeling M$^\S$ (2010) Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homeologs. \textsc {PLoS Biology} doi: \href{http://dx.doi.org/10.1371/journal.pbio.1000409}{10.1371/journal.pbio.1000409}\\
\textit{ Selected as an Editor's Choice by MaizeGDB Editorial Board} August 2010\\
\textit{ PLoS Biology Cover Article }
%\textit{ Recommended by Faculty of 1000 }


\item The International Brachypodium Initiative (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. \textsc {Nature} doi: \href{http://dx.doi.org/10.1038/nature08747}{10.1038/nature08747}

\end{etaremune}
%\subsection*{Publication impact over time}
%\begin{center}
%H-Index: 14 \href{https://scholar.google.com/citations?user=cik4JVYAAAAJ}{Google Scholar} \\
%\input{citefig.pgf}

    %Brachypodium genome paper (>850 citations) omitted for readability.
%\end{center}

%\begin{itemize}

\subsection*{Peer Reviewed Conference Proceedings}
\begin{etaremune}

\item Behera S, Deogun JS, \textbf{Lai X}, \textbf{Schnable JC} (2017) B529 DiCE: Discovery of Conserved Noncoding Sequences Efficiently. \textsc{IEEE BIBM 2017} Kansas City, MO, USA doi: \href{http://doi.org/10.1109/BIBM.2017.8217628}{10.1109/BIBM.2017.8217628}
\item Nani T, \textbf{Schnable JC}, Washburn J, Albert P, Pereira W, Birchler J, Souza Sobrinho F, Technio V. (2017) Construction of physical maps of chromosomes in brachiaria spp. beginning a journey. \textsc{11th European Cytogenetics Conference} Florence, Italy
\item Chaudhury SD, Steorger V, Samal A, {\bf Schnable JC}, {\bf Liang Z}, Yu J (2016) \href{http://www.schnablelab.org/Pubs/Sruti\_KDD\_FEWS.pdf}{Automated vegetative stage phenotyping analysis of maize plants using visible light images.} \textsc{KDD: Data Science for Food, Energy and Water} San Francisco, CA, USA
\end{etaremune}


%OTHER PUBS
\subsection*{Selected Other Publications}
\begin{etaremune}
\item Tang H, Lyons E, {\bf Schnable JC}. (2013) Early history of the angiosperms. Genomes of Herbaceus Land Plants. Editor: Andrew Paterson Publisher: Academic Press
\item Goff SA, {\bf Schnable JC}, Feldmann KA. (2013) The evolution of plant gene and genome sequencing. Genomes of Herbaceous Land Plants Editor: Andrew Paterson Publisher: Academic Press
\item {\bf Schnable JC} and Freeling M. (2012) Maize (Zea mays) as a model for studying the impact of gene and regulatory sequence loss following whole genome duplication. Polyploidy and Genome Evolution. Editors: Soltis PS \& Soltis DE Publisher: Springer New York, NY
\end{etaremune}


%PROFESSIONAL SERVICE
\addtolength{\leftskip}{-9mm}\section*{Service: selected, 2014-Present}
\subsection*{University}
\begin{itemize}
\item Consortium for Integrated Translational Biology (CITB)\hfill2014-Present
\item UNL Faculty Greenhouse Committee\hfill2015-Present
\item Department of Agronomy and Horticulture Peer Evaluation Committee\hfill2016-Present
\item Biotech Seminar Series Committe\hfill2017-Present
\item Agronomy and Horticulture Faculty Advisory Commitee\hfill2017-Present
\item Nebraska Food for Health Center Faculty Advisory Committee\hfill2017-Present
\item Orgamizing Committee \href{https://extension.unl.edu/statewide/panhandle/international-millet-symposium-2018/}{``International Millet Symposium 2018''}\hfill2018
\item Organizing Committee \href{http://nric.nebraska.edu/}{``Predictive Crop Design, Genome to Phenome''}\hfill2017
\item Search Committee, Director of Phenomic Sciences\hfill2017
\item Search Committee, Agricultural Research Division\hfill2016
\item Search Committee, Quantitative Life Sciences Initiative\hfill2016
\item Search Committee, Department of Agronomy and Horticulture \hfill2016
\item Organizing Committee \href{http://www.unl.edu/psi/2015-plant-science-symposium}{``Plant Phenomics: from pixels to traits''}\hfill2015
\end{itemize}
% List search committees, other UNL committees here 


\subsection*{Professional}
\begin{itemize}
\item Associate Editor: Molecular Plant\hfill2014-Present
\item Data Management Subcommittee, Maize Genetics Research Collaboration Network \hfill 2018-Present
\item MaizeGDB Advisory Committee\hfill 2018-Present
\item Grant Reviewer: NSF (panel \& ad hoc), USDA (panel), JGI (panel), Genome British Columbia (ad hoc). 
\item Peer Reviewer (selected, recent): Bioinformatics, BMC Plant Biology, G3: Genes|Genomes|Genetics, Genome Biology \& Evolution, Heredity, Journal of Experimental Botany, Molecular Biology and Evolution, Molecular Plant, Nature Communications, Nature Plants, New Phytologist, PeerJ, Photosynthesis Research, Plant Cell, Plant Cell \& Environment, The Plant Genome, The Plant Journal, Plant Methods, Plant Physiology, PLoS Genetics, Science
\end{itemize}

%SEMINARS
\section*{Invited Talks:}
\subsection*{External at Institutions}
\begin{itemize}
%\item Washington State University, Pullman, WA, USA\hfill2018
%\item Australia 
\item University of Delaware, Newark, DE, USA\hfill2018
\item Chinese Academy of Agricultural Sciences, Beijing, China\hfill2017
\item Beijing Academy of Agricultural and Forestry Sciences, Beijing, China\hfill2017
\item University of Minnesota, St. Paul, MN\hfill2017
\item Iowa State University, Ames, IA, USA\hfill2017
\item University of Missouri-Columbia, Columbia, MO, USA\hfill2017
\item Kansas State University, Manhattan, KS, USA\hfill2016
\item University of Georgia-Athens, Athens, GA, USA\hfill2016
\item University of California-San Diego, San Diego, CA, USA\hfill2016
\item Chinese Academy of Agricultural Sciences, Beijing, China\hfill2015
\item Beijing Academy of Agricultural and Forestry Sciences, Beijing, China\hfill2015
    \item Sichuan Agricultural University, Chengdu, China\hfill2015
\item Huazhong Agricultural University, Wuhan, China\hfill2015
\item Shandong Agricultural University, Tai'an, China\hfill2015
\item Monsanto, St. Louis, MO, USA\hfill2015
\item Henan Agricultural University, Zhengzhou, China\hfill2014
\item Chinese Academy of Tropical Agriculture, Haikou, China\hfill2014
\item Cornell University, Ithaca, NY, USA\hfill2014
\item Interdisciplinary Plant Group Seminar Series, University of Missouri, Columbia, MO, USA\hfill2012
\item Donald Danforth Plant Science Center, St. Louis, MO, USA\hfill2012
\item China Agricultural University, Beijing, China\hfill2012
\item Chinese Academy of Agricultural Sciences, Beijing, China\hfill2012
\item MaizeGDB, Ames, IA, USA\hfill2012
\item University of Arizona, Tucson, AZ, USA\hfill2011
\end{itemize}
\subsection*{External at Conferences}
\begin{center}
\emph{Invited presentations only. Excludes presentations selected based on abstracts or applications.}
\end{center}
\begin{itemize}
\item The Plant Phenome Journal Webinar Series\hfill2018
\item Entrepreneurship Panel, USDA FACT: Genomes to Fields, Ames, IA, USA\hfill2018
\item Plant Phenotype Session, Plant and Animal Genome, San Deigo, CA, USA\hfill2018
\item Plant Genome Evolution, Sitges, Spain\hfill2017
\item Purdue Plant Science Symposium (Student Organized), West Lafayette, IN, USA\hfill2017
\item P\textsuperscript{2}IRC Annual Symposium, Saskatoon, Saskatchewan, Canada\hfill2017
\item Maize Tools and Resources (Maize Genetics Conference pre-meeting), St. Louis, MO, USA\hfill2017
\item Phenome, Tucson, AZ, USA\hfill2017
\item Corn Breeding Research Meeting, Jacksonville, FL, USA\hfill2016
\item Molecular Plant Symposium: From Model Species to Crops, Shanghai, China\hfill2015
\item Corn Breeding Research Meeting, St. Charles, IL, USA\hfill2015
\item Life Technologies Session, Plant and Animal Genome, San Diego, CA, USA\hfill2015
\item Maize Session, Plant and Animal Genome, San Diego, CA, USA\hfill2015
\item Millet as Crop: Past and Future, Aohan, Inner Mongolia, China\hfill2014
\item Plant Genomes in China Meeting, Tai'an, China\hfill2012
\item American Society of Plant Biology, Austin, TX, USA\hfill2012
\item Polyploidy Session, Plant and Animal Genome, San Deigo, CA, USA\hfill2012
\item CSSA Translational Genomics Session, Plant and Animal Genome, San Diego, CA, USA\hfill2012
\end{itemize}
\subsection*{Internal}
\begin{itemize}
\item UNL Plant Phenomics Symposium\hfill2018
\item NeDA 2017: 2nd Nebraska Data Analytics Workshop, UNL\hfill2017
\item Water for Food Global Conference, UNL\hfill2017
%\item School of Biological Sciences Seminar Series, UNL\hfill2017
\item Complex Biosystems Seminar Series, UNL\hfill2017
\item Food Science Departmental Seminar Series, UNL\hfill2016
\item Animal Science Departmental Seminar Series, UNL\hfill2016
\item Agronomy \& Horticulture Departmental Seminar Series, UNL\hfill2015
\item Plant Science Retreat, UNL\hfill2014
\end{itemize}

\end{document}
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