Added config loading.

chipathlon/workflow.py

@@ -17,7 +17,7 @@ from Pegasus.DAX3 import *
 
 class Workflow(object):
 
-    def __init__(self, jobhome, run_file, param_file, host, username, password):
+    def __init__(self, jobhome, run_file, param_file, config_file, host, username, password):
         # Initialize db connection
         self.mdb = chipathlon.db.MongoDB(host, username, password)
         # Jobname info & err
@@ -27,6 +27,9 @@ class Workflow(object):
         # Input file info
         self.run_file = run_file
         self.param_file = param_file
+        self.config_file = config_file
+        with open(self.config_file, "r") as rh:
+            self.config = yaml.load(rh)
         # Dax specific info
         self.dax = ADAG(self.jobname)
         self.executables = {}