Commit c17b5649 authored by aknecht2's avatar aknecht2
Browse files

Updated conf for music.

parent 912a0b64
......@@ -36,7 +36,8 @@ peak_tools = [
"macs2",
"gem",
"peakranger",
"ccat"
"ccat",
"music"
]
# Peak_type validation
......@@ -45,7 +46,8 @@ peak_types = {
"macs2": ["narrow", "broad"],
"gem": ["narrow"],
"peakranger": ["narrow"],
"ccat": ["broad"]
"ccat": ["broad"],
"music": ["narrow", "punctate", "broad"]
}
# File extensions
......@@ -56,6 +58,7 @@ file_extensions = {
"sam": ["sam"],
"bam": ["bam"],
"bed": ["bed", "peak", "region", "narrowPeak", "broadPeak", "tagAlign", "narrowPeak.gz", "broadPeak.gz"],
"bin": ["bin"],
"bwa_genome": ["amb", "ann", "bwt", "pac", "sa"],
"bowtie2_genome": ["1.bt2", "2.bt2", "3.bt2", "4.bt2", "rev.1.bt2", "rev.2.bt2"],
"quality": ["quality"],
......@@ -108,7 +111,8 @@ resources = {
argument_types = {
"argument": ["string", "numeric"],
"file": ["file", "rawfile", "stdout", "stderr"],
"list": ["list"]
"list": ["list"],
"folder": ["folder", "rawfolder"]
}
# Defines information about arguments
......
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