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Resolve "MUSIC peak caller"

Merged aknecht2 requested to merge 24-music-peak-caller into master
12 files
+ 245
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@@ -38,7 +38,9 @@ class IdrGenerator(ModuleGenerator):
@@ -38,7 +38,9 @@ class IdrGenerator(ModuleGenerator):
self.output_files["gem"]["narrow"] = ["results_GEM_sorted.bed", "results_GPS_sorted.bed"]
self.output_files["gem"]["narrow"] = ["results_GEM_sorted.bed", "results_GPS_sorted.bed"]
self.output_files["spp"]["narrow"] = self.output_files["spp"]["broad"] = ["results_sorted.bed"]
self.output_files["spp"]["narrow"] = self.output_files["spp"]["broad"] = ["results_sorted.bed"]
self.output_files["macs2"]["narrow"] = self.output_files["macs2"]["broad"] = ["results_sorted.bed"]
self.output_files["macs2"]["narrow"] = self.output_files["macs2"]["broad"] = ["results_sorted.bed"]
 
self.output_files["music"]["narrow"] = ["sorted_scale_%s_all.bed" % (i,) for i in [129, 194, 291]]
self.output_files["music"]["punctate"] = ["sorted_scale_%s_all.bed" % (i,) for i in [129, 194, 291, 437, 656, 985, 1477, 2216]]
self.output_files["music"]["punctate"] = ["sorted_scale_%s_all.bed" % (i,) for i in [129, 194, 291, 437, 656, 985, 1477, 2216]]
 
self.output_files["music"]["broad"] = ["sorted_scale_%s_all.bed" % (i,) for i in [1459, 2189, 3284, 4926, 7389, 11084, 16626]]
if debug:
if debug:
print "[LOADING GENERATOR] IdrGenerator"
print "[LOADING GENERATOR] IdrGenerator"
return
return
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